Standard single-cell workflows
A start-to-end package to provide you with publish-ready data and visualizations, including:
- Transcripts quantification
- Quality control, normalization, data integration, and visualization
- Cell type annotation
- Finding marker genes
- Differential expression analysis
- Enrichment analysis
- Trajectory analysis
- Sub-clustering
- Multimodal data analysis (TCR/BCR, CITE-seq, Spatial)
- Generating processed data (Seurat/Scanpy
- Data curation
Collaborators can get access to our BBrowser platform to interactively explore their data
On-demand workflows
On-demand workflows performed by our experts.
- Cell-cell communication
- Gene regulatory network
- Co-expression analysis
- CNV inference
- Cell Type annotation
- Target validation using our single-cell database of more than 26 million cells
- Spatial imaging, cell segmentation, cell counting on microscopy images
- Consulting appropriate workflows to answer research questions
Constructing cell atlas
We can work with you to construct atlases of interest, e.g.: cell type atlases, disease landscapes, organ, and cancer type atlases,…
- Curating and integrating single cell data in the public and private domain
- Characterizing cell types and subtypes automatically or manually
- Answering research questions from the atlases
- Integrating the atlases to a platform for interactive exploration