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Publications

BioTuring research and ciations

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Benchmarking AlphaSC: A Leap in Single-Cell Data Processing

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IC-VAE: A Novel Deep Learning Framework for Interpreting Multiplexed Tissue Imaging Data.

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Venice: A New Algorithm for Finding Marker Genes in Single-Cell Transcriptomic Data

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An Entropy Approach for Choosing Gene Expression Cutoff

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Hera-T: an efficient and accurate approach for quantifying gene abundances from 10X-Chromium data with high rates of non-exonic reads

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A revisit of RSEM generative model and its EM algorithm for quantifying transcript abundances

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SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing

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SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing

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Differential responses to lithium in hyperexcitable neurons from patients with bipolar disorder

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Using single nuclei for RNA-seq to capture the transcriptome of postmortem neurons

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Ragout—a reference-assisted assembly tool for bacterial genomes

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Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci

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Sibelia: a scalable and comprehensive synteny block generation tool for closely related microbial genomes

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Paired de bruijn graphs: a novel approach for incorporating mate pair information into genome assemblers

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ExSPAnder: a universal repeat resolver for DNA fragment assembly

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