Spatial Transcriptomics data analysis made easy

Download User guide

Overlay gene expression on the spatial coordinates

See how a gene or multiple genes are expressed and correlated together on the spatial coordinates.

Interactively explore the spatial images in parallel with t-SNE and UMAP

BioTuring Browser supports viewing both t-SNE/UMAP and spatial images of the dataset at a time in multiple interactive windows. Selection of spots on a window can be reflected on another in real time.

Compare gene
expression among layers

Violin plots, box plots, bar plots, volcano plots, and heatmaps are available for easier comparison of gene expression among layers.

Find
layer-enriched expression signatures and processes

Interactively select any clusters or layers to find their marker genes and enriched processes.

Bioturing scRNA-seq software greatly accelerates and enables our research, through easy to use intuitive analytics, visualization and extensive database of curated and pre-processed experiments

Eugene Bolotin - Senior Bioinformatics Scientist, Kite Pharma

The BioTuring Browser is a game changer in the Immune Oncology field to speed up single cell data sharing among biologists, immunologists and bioinformaticians. Empowering collaboration in annotating cells, discovering unknown cell populations, cell states or cell interactions is crucial to draw the best picture ever of the highly heterogenous tumor microenvironment. Users have access to a growing public as well as their private knowledge base, which makes the BioTuring platform a swiss-army-knife for better understanding cells at the single cell level.

Molecular Oncology and Immunology Lab, IFOM

BBrowser allows biologists to handle scRNA-seq data without programming knowledge. Intuitive operation. Functions are updated. Public data can be imported. It is very helpful.

Researcher (Pharmacology), Chugai Pharmaceutical

I came across BBrowser while going through the Bioturing website and have been very impressed by the ease of use, capacity and capability of this unique platform. Within minutes from starting to use this tool, I was able to download single-cell sequencing datasets with metadata, obtain visualizations and biostatistical analyses including correlation and hierarchical clustering, analyse data by age, sex and pathology and carry differential gene expression analyses for my genes of interest. Overall, an amazing tool to have for every researcher engaged in scRNA approaches. Kudos to the developers for bringing this amazing platform to academics engaged in single-cell research. Looking forward to the addition of more studies/workflows and features to this already exciting software!

Anand Hardikar, Western Sydney University, Sydney Australia

The Bioturing Browser with single cell add-on provides one of the simplest interfaces for quickly moving from raw data to cluster analyses with minimal experience. The built-in HeraT alignment processes are remarkably quick and less computationally intensive than other scRNA-seq offerings.

Chris Ahuja - University of Toronto.

Bioturing Browser is an intuitive and powerful software for exploration and visualization of scRNA-Seq data. Its fast and easy access to the vast amounts of curated datasets is very helpful for our drug discovery research.

Niv Sabath - Senior Scientist, Compugen

Publications

Looking for more resources?